Home directory

What directory should I upload my files to? According to the web hosting panel, it is /home/myuserid, but when I log into FTP, I see a mydomain.com directory at the same level as /Maildir and /logs. Do all my files go where I go to when I log in (which I assume is /home/myuserid), or to the /mydomain.com directory?


Your website belongs in mydomain.com